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MQU_EvoGenomics

Scripts for the Montezuma Quail (MQU) evolutionary genomics project

Samarth Mathur, John M Tomeček, Luis A Tarango-Arámbula, Robert M Perez, J Andrew DeWoody, An evolutionary perspective on genetic load in small, isolated populations as informed by whole genome resequencing and forward-time simulations, Evolution, 2022;, qpac061, https://doi.org/10.1093/evolut/qpac061

Summarized repository structure

(See each repository for substructures and details)

├── BashScript
│   ├── Diversity
│   ├── MutationAge&Load
│   ├── ROH,Ancestry,&Demography
│   ├── ReadPreproccesing
│   ├── SLiM_Simulations
│   └── VariantCalling
├── RScripts
├── Lists


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