Deploy #1149
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name: Deploy | |
on: | |
push: | |
paths-ignore: | |
- "README.md" | |
- "**/docs/**" | |
- ".github/workflows/docs.yml" | |
pull_request: | |
branches: | |
- master | |
schedule: | |
- cron: "0 11 * * *" | |
jobs: | |
publish-pypi: | |
name: Publish to PyPi | |
if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags') | |
runs-on: ubuntu-latest | |
permissions: | |
# IMPORTANT: this permission is mandatory for trusted publishing | |
id-token: write | |
steps: | |
- name: Checkout source | |
uses: actions/checkout@v4 | |
- name: Set up Python 3.9 | |
uses: actions/setup-python@v5 | |
with: | |
python-version: 3.9 | |
- name: Build package | |
run: | | |
pip install wheel setuptools -U | |
python setup.py sdist | |
- name: Publish | |
uses: pypa/gh-action-pypi-publish@release/v1 | |
with: | |
skip-existing: true | |
test-publish-pypi: | |
name: Build & verify PyPi | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: 3.9 | |
- name: Install twine | |
run: | | |
python -m pip install twine | |
- name: Build package | |
run: | | |
pip install wheel setuptools -U | |
python setup.py sdist | |
- name: List result | |
run: | | |
ls -lh dist | |
- name: Check long_description | |
run: | | |
python -m twine check dist/* | |
build-conda: | |
name: Build in Conda | |
if: startsWith(github.event.ref, 'refs/tags') == false | |
runs-on: ${{ matrix.os }} | |
defaults: | |
run: | |
shell: bash -l {0} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ubuntu-latest, macos-latest, macos-12] | |
python-version: [3.9] | |
steps: | |
- name: Checkout | |
uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
# - name: Set up Python | |
# uses: actions/setup-python@v5 | |
# with: | |
# python-version: ${{ matrix.python-version }} | |
# - name: Cache conda | |
# uses: actions/cache@v4 | |
# env: | |
# # Increase this value to reset cache if etc/example-environment.yml has not changed | |
# CACHE_NUMBER: 0 | |
# with: | |
# path: ~/conda_pkgs_dir | |
# key: conda-${{ matrix.os }}-python-${{ matrix.python-version }}-${{ hashFiles('ci/environment.yml') }} | |
- name: Add conda ${{ matrix.python-version }} to system path | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
activate-environment: "test_env" | |
auto-activate-base: false | |
architecture: "x64" | |
miniforge-variant: Mambaforge | |
#miniforge-version: latest | |
python-version: ${{ matrix.python-version }} | |
auto-update-conda: true | |
environment-file: ci/environment.yml | |
use-only-tar-bz2: true | |
channel-priority: true | |
channels: conda-forge, xspecmodels, threeml | |
- name: Init Env | |
shell: bash -l {0} | |
run: | | |
# Make sure we fail in case of error | |
if [[ ${{matrix.os}} == ubuntu-latest ]]; | |
then | |
miniconda_os=Linux | |
compilers="gcc_linux-64 gxx_linux-64 gfortran_linux-64" | |
else # osx | |
miniconda_os=MacOSX | |
compilers="clang_osx-64 clangxx_osx-64 gfortran_osx-64" | |
# On macOS we also need the conda libx11 libraries used to build xspec | |
# We also need to pin down ncurses, for now only on macos. | |
xorg="xorg-libx11" | |
fi | |
export PKG_VERSION=$(python -c "import versioneer;print(versioneer.get_version())") | |
echo "PKG_VERSION=$PKG_VERSION" >> $GITHUB_ENV | |
echo "HOME= ${HOME}" | |
echo "Conda installation path ${CONDA}" | |
echo "Building ${PKG_VERSION}" | |
#echo "Python version: ${{matrix.python-version}}" | |
conda install codecov pytest-cov | |
- name: Conda list | |
shell: bash -l {0} | |
run: | | |
conda list | |
- name: Build the Distribution | |
shell: bash -l {0} | |
run: | | |
# Build package | |
#conda install conda-build -n base | |
mamba install -c conda-forge boa | |
#conda build --python=${{matrix.python-version}} conda-dist/recipe | |
conda mambabuild --python=${{matrix.python-version}} conda-dist/recipe | |
#conda install --use-local astromodels | |
conda install -c ${CONDA}/envs/test_env/conda-bld/ astromodels | |
- name: Test conda build | |
shell: bash -l {0} | |
run: | | |
cd astromodels/tests | |
echo "======> importing XSPEC..." | |
python -c "import astromodels.xspec" | |
python -m pytest -vv --cov=astromodels --cov-report=xml | |
env: | |
OMP_NUM_THREADS: 1 | |
MKL_NUM_THREADS: 1 | |
NUMEXPR_NUM_THREADS: 1 | |
MPLBACKEND: "Agg" | |
publish-conda: | |
name: Publish to Conda | |
if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags') | |
runs-on: ${{ matrix.os }} | |
strategy: | |
matrix: | |
os: [ubuntu-latest, macos-latest] | |
python-version: [3.9] | |
steps: | |
- name: Checkout | |
uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
- name: Cache conda | |
uses: actions/cache@v4 | |
env: | |
# Increase this value to reset cache if etc/example-environment.yml has not changed | |
CACHE_NUMBER: 0 | |
with: | |
path: ~/conda_pkgs_dir | |
key: conda-${{ matrix.os }}-python-${{ matrix.python-version }}-${{ hashFiles('ci/environment.yml') }} | |
- name: Add conda ${{ matrix.python-version }} to system path | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
activate-environment: "test_env" | |
auto-activate-base: false | |
architecture: "x64" | |
miniforge-variant: Mambaforge | |
#miniforge-version: latest | |
python-version: ${{ matrix.python-version }} | |
auto-update-conda: true | |
environment-file: ci/environment.yml | |
use-only-tar-bz2: true | |
channel-priority: true | |
channels: conda-forge, xspecmodels, threeml | |
- name: Init Env | |
shell: bash -l {0} | |
run: | | |
# Make sure we fail in case of error | |
if [[ ${{matrix.os}} == ubuntu-latest ]]; | |
then | |
miniconda_os=Linux | |
compilers="gcc_linux-64 gxx_linux-64 gfortran_linux-64" | |
else # osx | |
miniconda_os=MacOSX | |
compilers="clang_osx-64 clangxx_osx-64 gfortran_osx-64" | |
# On macOS we also need the conda libx11 libraries used to build xspec | |
# We also need to pin down ncurses, for now only on macos. | |
xorg="xorg-libx11" | |
fi | |
export PKG_VERSION=$(python -c "import versioneer;print(versioneer.get_version())") | |
echo "PKG_VERSION=$PKG_VERSION" >> $GITHUB_ENV | |
echo "HOME= ${HOME}" | |
echo "Conda installation path ${CONDA}" | |
echo "Building ${PKG_VERSION}" | |
- name: Build the Distribution | |
shell: bash -l {0} | |
run: | | |
# Build package | |
#conda install conda-build -n base | |
mamba install -c conda-forge boa | |
#conda build --python=${{matrix.python-version}} conda-dist/recipe | |
conda mambabuild --python=${{matrix.python-version}} conda-dist/recipe | |
#conda install --use-local astromodels | |
conda install -c ${CONDA}/envs/test_env/conda-bld/ astromodels | |
- name: Publish to Conda | |
shell: bash -l {0} | |
run: | | |
conda install -c conda-forge anaconda-client | |
echo "Uploading ${{matrix.os}} IsDev: ${ISDEV} " | |
if [[ "${ISDEV}" == "true" ]]; then | |
LABEL="--label dev" | |
fi | |
if [[ ${{matrix.os}} == ubuntu-latest ]]; | |
then | |
anaconda -v --show-traceback -t $UPLOAD_TOKEN upload -u threeml ${CONDA}/envs/test_env/conda-bld/linux-64/*.tar.bz2 --force $LABEL | |
else | |
anaconda -v --show-traceback -t $UPLOAD_TOKEN upload -u threeml ${CONDA}/envs/test_env/conda-bld/osx-64/*.tar.bz2 --force $LABEL | |
fi | |
env: | |
UPLOAD_TOKEN: ${{secrets.CONDA_UPLOAD_TOKEN}} | |
CURRENT_OS: ${{matrix.os}} | |
ISDEV: ${{contains(github.ref, 'dev')}} |