rna-velocity
Here are 23 public repositories matching this topic...
Spatial Transcriptomics Quantification pipeline for 10x Visium and H&E-stained whole slide images
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Aug 8, 2024 - Python
This repository contains coding scripts utilized for the analysis of Longitudinal scRNAseq of human pancreatic slices datasets
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Jul 7, 2023 - R
Entrain: Predicting Environmental Regulators of Differentiation Trajectories
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Nov 13, 2023 - R
Tutorials for using BRIE
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May 29, 2022 - Jupyter Notebook
collab | DFC
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Jul 6, 2023 - Jupyter Notebook
IGFBPL1 Retinal Microglia Project | Dong Feng Chen Lab collaboration | Schepens Eye Research Institute, Mass General Hospital, Harvard Medical School
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Jul 25, 2023 - Jupyter Notebook
Retinal ganglion cells regeneration in 2 days post optic nerve crush retina | Lydia Tai | Dong Feng Chen Lab collaboration | Schepens Eye Research Institute, Mass General Hospital, Harvard Medical School
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Jun 24, 2024 - R
Growth Hormone effect on Cartilage Growth Plate; Light-Sheet Microscopy; Pseudocoloring | Projects I started and still working on in Andrei Chagin Lab | Karolinska Institutet
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Aug 18, 2023 - Jupyter Notebook
Socs3/Spp1 Project on Microglia in OIR | Ye Sun Lab Collaboration Project | Boston Children's Hospital
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Dec 16, 2023 - Jupyter Notebook
Dynamical systems methods for RNA velocity analysis
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May 19, 2021 - Python
R pacakge for RNA velocity estimation with nonlinear models
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Feb 6, 2021 - R
Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.
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Sep 20, 2024 - R
Simulation based inference of differentiation trajectories from RNA velocity fields.
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Aug 22, 2023 - Python
Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments
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Aug 15, 2023 - Python
𝒫robabilistic modeling of RNA velocity ⬱
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Sep 18, 2024 - Python
Predict RNA velocity through deep learning
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Dec 12, 2023 - Jupyter Notebook
Module 4 for HKU Single-cell Workshop
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Jul 6, 2021 - HTML
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