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@uzh-dqbm-cmi

Krauthammer Lab

University of Zurich & University Hospital Zurich

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  1. ARGON ARGON Public

    Progressive Transformer-Based Generation of Radiology Reports

    Python 25 2

  2. crispr crispr Public

    CSS 9 6

  3. PRIDICT2 PRIDICT2 Public

    Python 7 4

  4. side-effects side-effects Public

    Python 6 1

  5. PRIDICT PRIDICT Public

    Prime editing guide RNA prediction

    Python 6 5

  6. auto-discern auto-discern Public

    Python 3 2

Repositories

Showing 10 of 33 repositories
  • fragmentstein Public

    Create a BAM file out of insensitive fragments data (i.e. FinaleDB frag.tsv.bgz file) including sequences extracted from a reference genome.

    uzh-dqbm-cmi/fragmentstein’s past year of commit activity
    Shell 2 GPL-3.0 0 1 0 Updated Jul 4, 2024
  • scRNA-slow_frozen Public

    scRNAseq scripts for the Live slow-frozen human tumor tissue paper

    uzh-dqbm-cmi/scRNA-slow_frozen’s past year of commit activity
    R 0 MIT 0 0 0 Updated Jul 1, 2024
  • lab-website Public
    uzh-dqbm-cmi/lab-website’s past year of commit activity
    TeX 1 MIT 3 0 7 Updated Jun 27, 2024
  • PRIDICT2 Public
    uzh-dqbm-cmi/PRIDICT2’s past year of commit activity
    Python 7 MIT 4 1 0 Updated Jun 24, 2024
  • cfDNA-Flow Public

    A modular bioinformatics pipeline offering a range of preprocessing options for cell-free DNA (cfDNA) analysis.

    uzh-dqbm-cmi/cfDNA-Flow’s past year of commit activity
    HTML 1 GPL-3.0 0 0 0 Updated Jun 14, 2024
  • mridle Public

    Resource Optimization for Radiology

    uzh-dqbm-cmi/mridle’s past year of commit activity
    Python 0 0 1 5 Updated Jun 10, 2024
  • scqm Public
    uzh-dqbm-cmi/scqm’s past year of commit activity
    Python 0 0 0 0 Updated Jun 1, 2024
  • Tnpb Public
    uzh-dqbm-cmi/Tnpb’s past year of commit activity
    Jupyter Notebook 2 1 0 0 Updated May 13, 2024
  • singularity_recipes Public

    Singularity image with toolbox for scRNA-seq analysis including some useful R packages

    uzh-dqbm-cmi/singularity_recipes’s past year of commit activity
    R 1 MIT 1 0 0 Updated Mar 12, 2024
  • PRIDICT Public

    Prime editing guide RNA prediction

    uzh-dqbm-cmi/PRIDICT’s past year of commit activity
    Python 6 MIT 5 1 0 Updated Mar 5, 2024
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