A comprehensive DNA methylation atlas for the Chinese population through nanopore long-read sequencing of 106 individuals
ChinaMethAtlas is a project focused on the analysis of DNA methylation data for the Chinese population. The project aims to provide tools and methods for the preprocessing, analysis, and visualization of methylation data. This repository contains scripts for data processing and visulization to facilitate methylation studies.
- Data preprocessing scripts
- Data analysis methods
- Visulization tools for results
data/
: Contains raw and processed data filesscripts/
: Contains scripts for data processing and analysisplots/
: Contains generated plots and visualizationsdocs/
: Documentation and Usage instructions
git clone https://github.com/YLeeHIT/ChinaMethAtlas.git
cd ChinaMethAtlas
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Data Preprocessing:
python scripts/data_preprocessing.py
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Data Analysis:
bash scripts/data_analysis.sh
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Results Visulization:
Rscript scripts/plot_results.R
This project is licensed under the MIT License. See the LICENSE file for more details.
If you use ChinaMethAtlas in your research, please cite the following paper: A Comprehensive Tool for DNA Methylation Analysis in the Chinese population.
For any questions, please contact email