Version 1.5.170

Downloads

tlf_1.5.170.tar.gz
tlf_1.5.170.zip

Documentation

https://www.open-systems-pharmacology.org/TLF-Library

What's Changed

• Lower Limit Of Quantification (LLOQ) can be added on time-profile plots and obs-vs-pred plots.
• The xLimits and yLimits argument in PlotConfiguration are renamed xAxisLimits and yAxisLimits.
  This will crop the axis limits but keep all the data to generate the plot (see ggplot2::coord_cartesian).
• New xValuesLimits and yValuesLimits argument in PlotConfiguration to filter the data used to generate the plot. (see ggplot2::scale_continuous_x).
• Groups names are now wrapped on several lines if their number of characters is longer than 60.
• Plots and plotGrids labels (titles, subtitles, caption and axis labels) are now automatically fitting plot's width and wrapped on several lines if too long.
• Plot labels texts are now sanitized from any unsupported characters.
• Plot labels now have margin around them. This can be configured in Label objects.

Minor improvements and bug fixes

• Error bars cap sized are now drawn only if the error bars are displayed.
• Fix a bug where error bars caps were wrongly displayed #1410

Full Changelog: v1.5.158...v1.5.170

Version 1.5.158

Downloads

tlf_1.5.158.tar.gz
tlf_1.5.158.zip

Documentation

https://www.open-systems-pharmacology.org/TLF-Library

What's Changed

• Lower Limit Of Quantification (LLOQ) can be added on time-profile plots and obs-vs-pred plots.
• The xLimits and yLimits argument in PlotConfiguration are renamed xAxisLimits and yAxisLimits.
  This will crop the axis limits but keep all the data to generate the plot (see ggplot2::coord_cartesian).
• New xValuesLimits and yValuesLimits argument in PlotConfiguration to filter the data used to generate the plot. (see ggplot2::scale_continuous_x).
• Groups names are now wraped on several lines if their number of characters is longer than 60.
• Plots and plotGrids labels (titles, subtitles, caption and axis labels) are now automatically fitting plot's width and wraped on several lines if too long.
• Plot labels texts are now sanitized from any unsupported characters.
• Plot labels now have margin around them. This can be configured in Label
  objects.

New Contributors

• @Felixmil made their first contribution in #418

Full Changelog: v1.5.125...v1.5.158

Version 1.5.125

Downloads

tlf_1.5.125.tar.gz
tlf_1.5.125.zip

Documentation

https://www.open-systems-pharmacology.org/TLF-Library/

Minor improvements and bug fixes

• dataMapping objects do not keep factor levels as is (#406)
• Prevent legend update to crash time profile plots (#409 )

Version 1.5.121

Downloads

tlf_1.5.121.tar.gz
tlf_1.5.121.zip

Documentation

https://www.open-systems-pharmacology.org/TLF-Library/

New features

• New plots and their corresponding classes are now available :

  • plotQQ() (#362)
  • plotCumulativeTimeProfile() (#363)
  • plotObservedTimeProfile() (#390)
  • plotSimulatedTimeProfile() (#391)

• Time Profile plots handle dual axis plots (#392)

• Histograms can use normalized y axis (#383, #3889)

• New helpers for creating symmetric plots are available (#350)

Minor improvements and bug fixes

• Minor ticks can be displayed

Version 1.4.89

Downloads

tlf_1.4.89.tar.gz
tlf_1.4.89.zip

Documentation

https://www.open-systems-pharmacology.org/TLF-Library/

New features

• New helper functions and parameters to facilitate usage of plot functions (#301):

  • Function getLinesFromFoldDistance tanslates fold distance values into lines argument for dataMapping objects.
  • Functions plotDDIRatio, plotPKRatio, plotObsVsPred, plotResVsPred and plotResVsTime include optional parameters such as foldDistance, deltaGuest or smoother.

Minor improvements and bug fixes

• PlotGridConfiguration class adds new fields to control the position of the individual plot tags and aesthetic properties of the tag text. (#293)

Version 1.3.66

Downloads

tlf_1.3.66.tar.gz
tlf_1.3.66.zip

Documentation

https://www.open-systems-pharmacology.org/TLF-Library/

New features

• New function plotGrid() to create a plot grid and PlotGridConfiguration class to specify its properties.
• The default theme for all plots is the new useMinimalTheme().

Minor improvements and bug fixes

• Log scale plots use prettier ticks and ticklabels (#199)
• Creation of additional helper enums: ExportFormats, ExportUnits, FontFaces and Alignements (#263)
• Plots support transparency of ribbons, points and lines defined by field alpha (#227, #272)

What's Changed

• 147 plot obs vs pred by @pchelle in #148
• Fixes #151 use coord_cartesian by @pchelle in #152
• Fixes #149 provides a functions to plot res vs pred/time by @pchelle in #155
• Fixes #146 provide functions to export plot configuration as R code by @pchelle in #157
• housekeeping by @IndrajeetPatil in #159
• Bug fixing osp example by @pchelle in #166
• add a static website for the package by @IndrajeetPatil in #167
• 168 molecule legend by @pchelle in #169
• closes #164; rebuild website articles by @IndrajeetPatil in #172
• closes #173 by @IndrajeetPatil in #175
• adding vignette urls to docs by @IndrajeetPatil in #177
• closes #174 by @IndrajeetPatil in #180
• Fixes #181 center label when angles are used by @pchelle in #182
• add option for generating guest function outputs for residualVsObserv… by @abdullahhamadeh in #176
• Complement documentation for atom plots by @pchelle in #185
• Fixes #186 coord_cartesian update both axis limits by @pchelle in #189
• 187 histograms by @pchelle in #188
• Remove cache by @msevestre in #191
• Fixes #192 replace geom_abline by geom_hline for horizontal lines by @pchelle in #193
• update website; use bootstrap 5 by @IndrajeetPatil in #195
• closes #173 by @IndrajeetPatil in #196
• add option for residual vs observed ddi ratio horizontal line by @abdullahhamadeh in #194
• adds github actions by @IndrajeetPatil in #197
• Fixes #199 Fixes #154 use log ticks and log labels by @pchelle in #201
• fixes #203 Add artifacts without version number to enable usage as pe… by @Yuri05 in #204
• Set of predifined themes by @pchelle in #205
• Fixes #207 Remove unwanted vertical bars from errorbars legend by @pchelle in #208
• Closes #210 clean documentation by @pchelle in #211
• 112 time profile doc by @pchelle in #212
• 209 use ospsuite utils by @pchelle in #213
• Fixes #206 restore vignette image files by @pchelle in #215
• Fixes #220 expressions are check first when creating plot ticks by @pchelle in #221
• updating git submodule; closes #184 by @IndrajeetPatil in #219
• remove unused reshape2 dependency; bump R version by @IndrajeetPatil in #226
• Fixes #227 ribbon transparency can be changed in all plots by @pchelle in #228
• 224 time profile mapping by @pchelle in #229
• 223 minimal theme by default by @pchelle in #233
• 231 transparent legend keys by @pchelle in #232
• 216 language settings by @pchelle in #240
• 237 export configuration by @pchelle in #239
• 234 alignment by @pchelle in #244
• move plot grid function and class from ospsuite by @IndrajeetPatil in #246
• Add default color map for ospsuite plots by @IndrajeetPatil in #247
• Fixes #245 allow transparency for lines and points by @pchelle in #250
• Fixes #249 allow data expansion to axes by @pchelle in #251
• Fixes #252 by default labels are centered by @pchelle in #258
• Fixes #254 diamond later in Shapes enum by @pchelle in #257
• Fixes #255 all aesthetics are updated in time profile plots by @pchelle in #256
• Fixes #248 include caption in LabelConfiguration by @pchelle in #259
• Fixes #263 add enum helpers for units and format by @pchelle in #266
• add $addPlots() method to PlotGridConfiguration by @IndrajeetPatil in #269
• Fixes #253 default expand for ddi ratio and other plot configurations by @pchelle in #265
• Fixes #264 Avoid manual update for the caption of time profile plot by @pchelle in #271
• Add manual website in docs folder by @IndrajeetPatil in #276
• Bump package version; update NEWS by @IndrajeetPatil in #277

New Contributors

• @IndrajeetPatil made their first contribution in #159

Full Changelog: v1.2.5...v1.3.66

Version 1.2.5

v1.2.5

Fixes #144 "blank" shape is ggplot shape 32 (#145)

Version 1.1.1

Version 1.1 of the TLF-Library. This is the same version as the 1.0.68 with the exception of the minor bump in release to ensure the correct versioning

Version 1.0.68

First official release of the TLF Library