[DO NOT MERGE] diff btw 2.2.x and 2.1.x #7760

Rhett-Ying · 2024-08-30T05:45:25Z

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The PR title starts with [$CATEGORY] (such as [NN], [Model], [Doc], [Feature]])
I've leverage the tools to beautify the python and c++ code.
The PR is complete and small, read the Google eng practice (CL equals to PR) to understand more about small PR. In DGL, we consider PRs with less than 200 lines of core code change are small (example, test and documentation could be exempted).
All changes have test coverage
Code is well-documented
To the best of my knowledge, examples are either not affected by this change, or have been fixed to be compatible with this change
Related issue is referred in this PR
If the PR is for a new model/paper, I've updated the example index here.

Changes

Co-authored-by: Muhammed Fatih BALIN <m.f.balin@gmail.com>

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>

)

…eds`. (#7214) Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

…7212)

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>

…ic algorithm (#7310) Co-authored-by: Hongzhi (Steve), Chen <chenhongzhi.nkcs@gmail.com>

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>

…#7325)

Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

Co-authored-by: Ubuntu <ubuntu@ip-172-31-21-218.ap-northeast-1.compute.internal>

…`node_pairs`. (#7341) Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

Co-authored-by: Ubuntu <ubuntu@ip-172-31-21-218.ap-northeast-1.compute.internal>

Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

Co-authored-by: Muhammed Fatih BALIN <m.f.balin@gmail.com> Co-authored-by: Xinyu Yao <77922129+yxy235@users.noreply.github.com> Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

RamonZhou and others added 30 commits March 1, 2024 15:36

[GraphBolt][PyG] Modify PyG example with to_pyg_data (#7123)

d4c8a04

Co-authored-by: Muhammed Fatih BALIN <m.f.balin@gmail.com>

[dev] bump master version to 2.2 (#7185)

4bd2ead

[doc] install cpu version by default in notebooks (#7186)

290dadb

[GraphBolt] Slight gb.expand_indptr improvement on CPU. (#7189)

8c28f98

[doc] do not display nn.tensorflow and nn.mxnet (#7190)

08ad40a

[doc] use tqdm from tqdm.auto (#7191)

8b266f5

[GraphBolt] torch.compile() support for gb.expand_indptr. (#7188)

bc97873

[GraphBolt] Add recommended PyG example. (#7183)

97b6631

[DistGB] revert toindex() but refine tests (#7197)

a6505e8

[GraphBolt][PyG] Add more attributes in to_pyg_data (#7196)

12fab55

[Misc] Move pyg example. (#7199)

1ec0092

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>

[DistGB] Enable GraphBolt for node classification on heterograph (#7198)

89e4943

[GraphBolt] Modify labels dtype. (#7200)

a7f1ab9

[DistDGL] Fixing warning in test_new_kvstore. (#7180)

3fd6a5d

[DistDGL] Fixing bug in test_dist_objects (#7179)

996a936

[DistGB] update documentation (#7201)

34ae70b

Reactivation of one of the GPU tests. (#7193)

b0982fe

[DistGB] enable replacement sampling with GraphBolt API (#7202)

8ab27b0

[examples] update README about partition conversion (#7203)

2bda158

[GraphBolt] Implement dependent minibatching for labor. (#7205)

f0c7efa

[GraphBolt] Refactor NeighborSamplerImpl (#7207)

93990a9

[GraphBolt] Implement labor dependent minibatching - python side. (#7208

a272efe

)

[GraphBolt] Fixing warning in test_to_pyg_data. (#7210)

aed161e

[release] add pandas into dependencies (#7218)

396b0ec

[GraphBolt] Update to_pyg_data() to support get batch_size from `se…

858c0b8

…eds`. (#7214) Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

[GraphBolt][Doc] Update layer_neighbor documentation for new args. (#…

74c5e31

…7212)

[GraphBolt] Labor dependent template specialization. (#7220)

a2c5472

[Doc] The len(data) of TUDataset('DD') must be 1178. (#7219)

7129905

[GraphBolt][CUDA] Specialize non-weighted neighbor sampling impl (#7215)

9632ab1

[GraphBolt][Doc] Correct typo to fix rendering issue. (#7224)

329d718

frozenbugs and others added 29 commits April 18, 2024 18:03

[Misc] Update clang-format. (#7317)

b69308f

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>

[Misc] Update clang format. (#7318)

00cb0f9

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>

Revert "[Misc] Update clang format." (#7321)

afcd8ff

Revert "[Misc] Update clang-format." (#7322)

2925cbd

Update clang (#7319)

6f9c20c

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>

[GraphBolt][CUDA] Make _convert_to_sampled_subgraph lighter. (#7312)

a3d20dc

[Determinism] Enable environment var to use cusparse spmm determinist…

a4e1969

…ic algorithm (#7310) Co-authored-by: Hongzhi (Steve), Chen <chenhongzhi.nkcs@gmail.com>

[Misc] Add Triston to jenkins allowlist. (#7327)

0d62d45

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>

[GraphBolt][CUDA] Add missing thrust include for later CCCL versions. (…

9a340c7

…#7325)

[GraphBolt] Enable DistributedItemSampler test only on CPU. (#7323)

d853a01

Revert "[GraphBolt] Quick fix for GCC 8" (#7328)

b68a2fc

[CUDA] Remove unused headers for CCCL 2.4 compat (#7329)

7de2e51

[GraphBolt][CUDA] Minibatch.to() patch. (#7330)

324fd97

[GraphBolt][CUDA] Update copy_to. (#7332)

c997434

Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

[GraphBolt] Remove unused attributes in minibatch. (#7337)

697a997

Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

[Temporal]Fix tensor option mismatch issue (#7346)

2251683

Co-authored-by: Ubuntu <ubuntu@ip-172-31-21-218.ap-northeast-1.compute.internal>

[GraphBolt] Update docstring related to cleaning up seed_nodes and …

ba9c152

…`node_pairs`. (#7341) Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

[GraphBolt] Update tests related to seeds refactor. (#7352)

6133cec

Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

[GraphBolt][Doc] Update docs related to seeds. (#7351)

3afa105

Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

[dev] upgrade minimum required torch version to 2.0.0 (#7358)

0de1de3

[Temporal] Add link prediction example (#7347)

ce37a93

Co-authored-by: Ubuntu <ubuntu@ip-172-31-21-218.ap-northeast-1.compute.internal>

[GraphBolt] Hyperlink support in subgraph_sampler. (#7354)

9090a87

Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

[GraphBolt] Optimize hetero sampling on CPU (#7360)

658b208

[graphbolt] Disable liburing (#7366)

0d9a09d

[GraphBolt] Hetero CPU sampling bug fix. (#7369)

6b140f2

[GraphBolt] Refactor sampling (#7367)

f0213d2

[release] update version (#7373)

8873fb2

[release] cherry-pick from master and release for 2.2.1 (#7388)

1b5c02c

Co-authored-by: Muhammed Fatih BALIN <m.f.balin@gmail.com> Co-authored-by: Xinyu Yao <77922129+yxy235@users.noreply.github.com> Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>

[release] bump version to 2.2.1 (#7389)

2a1ac58

Rhett-Ying closed this Sep 17, 2024

This pull request was closed.

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[DO NOT MERGE] diff btw 2.2.x and 2.1.x #7760

[DO NOT MERGE] diff btw 2.2.x and 2.1.x #7760

Rhett-Ying commented Aug 30, 2024

[DO NOT MERGE] diff btw 2.2.x and 2.1.x #7760

[DO NOT MERGE] diff btw 2.2.x and 2.1.x #7760

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Rhett-Ying commented Aug 30, 2024

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