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[DO NOT MERGE] diff btw 2.2.x and 2.1.x #7760

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[DO NOT MERGE] diff btw 2.2.x and 2.1.x #7760

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Commits on Mar 1, 2024

  1. [GraphBolt][PyG] Modify PyG example with to_pyg_data (#7123) 

    Co-authored-by: Muhammed Fatih BALIN <m.f.balin@gmail.com>
    @RamonZhou @mfbalin
    RamonZhou and mfbalin committed Mar 1, 2024
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  2. [dev] bump master version to 2.2 (#7185)

    @Rhett-Ying
    Rhett-Ying committed Mar 1, 2024
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  3. [doc] install cpu version by default in notebooks (#7186)

    @Rhett-Ying
    Rhett-Ying committed Mar 1, 2024
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Commits on Mar 4, 2024

  1. [GraphBolt] Slight gb.expand_indptr improvement on CPU. (#7189)

    @mfbalin
    mfbalin committed Mar 4, 2024
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  2. [doc] do not display nn.tensorflow and nn.mxnet (#7190)

    @Rhett-Ying
    Rhett-Ying committed Mar 4, 2024
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  3. [doc] use tqdm from tqdm.auto (#7191)

    @Rhett-Ying
    Rhett-Ying committed Mar 4, 2024
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Commits on Mar 5, 2024

  1. [GraphBolt] torch.compile() support for gb.expand_indptr. (#7188)

    @mfbalin
    mfbalin committed Mar 5, 2024
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Commits on Mar 6, 2024

  1. [GraphBolt] Add recommended PyG example. (#7183)

    @mfbalin
    mfbalin committed Mar 6, 2024
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  2. [DistGB] revert toindex() but refine tests (#7197)

    @Rhett-Ying
    Rhett-Ying committed Mar 6, 2024
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  3. [GraphBolt][PyG] Add more attributes in to_pyg_data (#7196)

    @RamonZhou
    RamonZhou committed Mar 6, 2024
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  4. [Misc] Move pyg example. (#7199) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
    @frozenbugs
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Commits on Mar 7, 2024

  1. [DistGB] Enable GraphBolt for node classification on heterograph (#7198)

    @Rhett-Ying
    Rhett-Ying committed Mar 7, 2024
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  2. [GraphBolt] Modify labels dtype. (#7200)

    @yxy235
    yxy235 committed Mar 7, 2024
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  3. [DistDGL] Fixing warning in test_new_kvstore. (#7180)

    @drivanov
    drivanov committed Mar 7, 2024
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  4. [DistDGL] Fixing bug in test_dist_objects (#7179)

    @drivanov
    drivanov committed Mar 7, 2024
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  5. [DistGB] update documentation (#7201)

    @Rhett-Ying
    Rhett-Ying committed Mar 7, 2024
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Commits on Mar 8, 2024

  1. Reactivation of one of the GPU tests. (#7193)

    @drivanov
    drivanov committed Mar 8, 2024
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  2. [DistGB] enable replacement sampling with GraphBolt API (#7202)

    @Rhett-Ying
    Rhett-Ying committed Mar 8, 2024
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  3. [examples] update README about partition conversion (#7203)

    @Rhett-Ying
    Rhett-Ying committed Mar 8, 2024
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Commits on Mar 11, 2024

  1. [GraphBolt] Implement dependent minibatching for labor. (#7205)

    @mfbalin
    mfbalin committed Mar 11, 2024
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Commits on Mar 13, 2024

  1. [GraphBolt] Refactor NeighborSamplerImpl (#7207)

    @mfbalin
    mfbalin committed Mar 13, 2024
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  2. [GraphBolt] Implement labor dependent minibatching - python side. (#7208 

    )
    @mfbalin
    mfbalin committed Mar 13, 2024
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Commits on Mar 17, 2024

  1. [GraphBolt] Fixing warning in test_to_pyg_data. (#7210)

    @drivanov
    drivanov committed Mar 17, 2024
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Commits on Mar 18, 2024

  1. [release] add pandas into dependencies (#7218)

    @Rhett-Ying
    Rhett-Ying committed Mar 18, 2024
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  2. [GraphBolt] Update to_pyg_data() to support get batch_size from `se… 

    …eds`. (#7214)

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    @yxy235
    yxy235 and Ubuntu committed Mar 18, 2024
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  3. [GraphBolt][Doc] Update layer_neighbor documentation for new args. (#… 

    …7212)
    @mfbalin
    mfbalin committed Mar 18, 2024
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  4. [GraphBolt] Labor dependent template specialization. (#7220)

    @mfbalin
    mfbalin committed Mar 18, 2024
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  5. [Doc] The len(data) of TUDataset('DD') must be 1178. (#7219)

    @Chaos-Hu-edu
    Chaos-Hu-edu committed Mar 18, 2024
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  6. [GraphBolt][CUDA] Specialize non-weighted neighbor sampling impl (#7215)

    @mfbalin
    mfbalin committed Mar 18, 2024
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Commits on Mar 19, 2024

  1. [GraphBolt][Doc] Correct typo to fix rendering issue. (#7224)

    @mfbalin
    mfbalin committed Mar 19, 2024
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Commits on Mar 20, 2024

  1. [GraphBolt] Remove unique requirement from in_subgraph. (#7222)

    @mfbalin
    mfbalin committed Mar 20, 2024
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  2. [GraphBolt] Fix sparse example. (#7234) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Mar 20, 2024
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Commits on Mar 22, 2024

  1. [GraphBolt] Update minibatch to to support seeds. (#7235) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Mar 22, 2024
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Commits on Mar 25, 2024

  1. [GraphBolt] Make unique_and_compact deterministic (#7217)

    @RamonZhou
    RamonZhou committed Mar 25, 2024
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Commits on Mar 26, 2024

  1. [CUDA] Make sanity check optional for dgl.create_block. (#7240)

    @mfbalin
    mfbalin committed Mar 26, 2024
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Commits on Mar 27, 2024

  1. [GraphBolt] Modify _seeds_preprocess in subgraph_sampler. (#7242) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Mar 27, 2024
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  2. [GraphBolt] Modify _init_all_nodes_set to use seeds. (#7243) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Mar 27, 2024
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Commits on Mar 28, 2024

  1. [GraphBolt] Fix to when using seeds. (#7245) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Mar 28, 2024
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Commits on Apr 1, 2024

  1. [Graphbolt] Disk feature fetcher (#7128) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-40-250.ap-northeast-1.compute.internal>
    @xiangyuzhi
    xiangyuzhi and Ubuntu committed Apr 1, 2024
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  2. [GraphBolt] Modify examples to use seeds. (#7231) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Apr 1, 2024
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  3. [DistGB] update CPU util of RGCN example (#7255)

    @Rhett-Ying
    Rhett-Ying committed Apr 1, 2024
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Commits on Apr 2, 2024

  1. [GraphBolt] Update __len__() and __getitem__() of ItemSet (#7253)

    @Skeleton003
    Skeleton003 committed Apr 2, 2024
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  2. [GraphBolt] Hack for original seed_nodes and node_pairs. (#7248) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Apr 2, 2024
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Commits on Apr 3, 2024

  1. [Doc]fix ondisk_dataset_homograph.ipynb (#7258)

    @MikuSugar
    MikuSugar committed Apr 3, 2024
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  2. [GraphBolt] PyG advanced example torch.compile() bug workaround. (#… 

    …7259)
    @mfbalin
    mfbalin committed Apr 3, 2024
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  3. [Misc] Update ondisk_dataset_heterograph.ipynb (#7261)

    @Skeleton003
    Skeleton003 committed Apr 3, 2024
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  4. [GraphBolt][CUDA] Optimize hetero sampling. (#7223)

    @mfbalin
    mfbalin committed Apr 3, 2024
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  5. [GraphBolt] Update notebook examples. (#7266) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Apr 3, 2024
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  6. [Dev] add contributor to CI authority (#7267) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-10-164.us-west-2.compute.internal>
    @pyynb
    pyynb and Ubuntu committed Apr 3, 2024
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Commits on Apr 6, 2024

  1. [GraphBolt][CUDA] Refactor Gather operation. (#7269)

    @mfbalin
    mfbalin committed Apr 6, 2024
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  2. [GraphBolt][CUDA] Remove overlap graph variable hacks. (#7263)

    @mfbalin
    mfbalin committed Apr 6, 2024
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Commits on Apr 7, 2024

  1. [GraphBolt][Tutorial] MultiGPU tutorial as a notebook (#7134)

    @mfbalin
    mfbalin committed Apr 7, 2024
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  2. [Misc] Update liburing version to avoid unexpected dirty commit after… 

    … build. (#7275)

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
    @frozenbugs
    frozenbugs and Ubuntu committed Apr 7, 2024
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  3. [GraphBolt][CUDA] Sample neighbors synchronization optimization. (#7264)

    @mfbalin
    mfbalin committed Apr 7, 2024
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  4. [GraphBolt] Add optimized unique_and_compact_batched. (#7239)

    @mfbalin
    mfbalin committed Apr 7, 2024
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  5. [GraphBolt] Update notebooks about how to construct ondisk datasets. (#… 

    …7268)

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    @yxy235
    yxy235 and Ubuntu committed Apr 7, 2024
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Commits on Apr 8, 2024

  1. [GraphBolt] Quick fix for GCC 8 (#7279)

    @mfbalin
    mfbalin committed Apr 8, 2024
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  2. [CUDA] Add Ada architecture to DGL architecture list. (#7282)

    @mfbalin
    mfbalin committed Apr 8, 2024
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  3. [GraphBolt] Update dataset names that exposed to users in examples. (#… 

    …7280)

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    @yxy235
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Commits on Apr 9, 2024

  1. [GraphBolt] Update name used in LegacyDataset. (#7283) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Apr 9, 2024
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Commits on Apr 10, 2024

  1. [Misc] rename a variable (#7260)

    @Skeleton003
    Skeleton003 committed Apr 10, 2024
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  2. [GraphBolt][CUDA] Better TORCH_CUDA_ARCH_LIST initialization. (#7293)

    @mfbalin
    mfbalin committed Apr 10, 2024
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Commits on Apr 11, 2024

  1. [GraphBolt][CUDA] Link prediction --mode=cuda-cuda fix. (#7294)

    @mfbalin
    mfbalin committed Apr 11, 2024
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Commits on Apr 12, 2024

  1. [GraphBolt] Remove old version exclude edges. (#7299) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Apr 12, 2024
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  2. [CUDA][Bug] CSR transpose bug in CUDA 12 (#7295)

    @mfbalin
    mfbalin committed Apr 12, 2024
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Commits on Apr 15, 2024

  1. [Misc] Using the aliases of builtin types like np.int is deprecated (#… 

    …7300)
    @songqing
    songqing committed Apr 15, 2024
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  2. [GraphBolt] Update docstring of itemset.py. (#7303) 

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    @yxy235
    yxy235 and Ubuntu committed Apr 15, 2024
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  3. [GraphBolt] Remove old version negative sampler. (#7302) 

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Commits on Apr 16, 2024

  1. [GraphBolt] Update docstring of ondisk dataset. (#7306) 

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    @yxy235
    yxy235 and Ubuntu committed Apr 16, 2024
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  2. [GraphBolt] Remove old version subgraph sampler. (#7305) 

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    @yxy235
    yxy235 and Ubuntu committed Apr 16, 2024
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  3. [Misc] Fix validation dataset's usage in RGCN link example (#7308)

    @songqing
    songqing committed Apr 16, 2024
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  4. [GraphBolt] Remove old version to in MiniBatch. (#7309) 

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Commits on Apr 18, 2024

  1. [GraphBolt] Disable support for F_contiguous arrays in DiskBasedFeatu… 

    …re (#7316)

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    @pyynb @Rhett-Ying
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  2. [GraphBolt][CUDA] Don't link against libcuda.so. (#7313)

    @mfbalin
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  3. [GraphBolt] Fix doc string of DiskBasedFeature (#7314) 

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    @pyynb
    pyynb and Ubuntu committed Apr 18, 2024
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  4. [Misc] Update clang-format. (#7317) 

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    @frozenbugs
    frozenbugs and Ubuntu committed Apr 18, 2024
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  5. [Misc] Update clang format. (#7318) 

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    @frozenbugs
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  6. Revert "[Misc] Update clang format." (#7321)

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  7. Revert "[Misc] Update clang-format." (#7322)

    @frozenbugs
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  8. Update clang (#7319) 

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  9. [GraphBolt][CUDA] Make _convert_to_sampled_subgraph lighter. (#7312)

    @mfbalin
    mfbalin committed Apr 18, 2024
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Commits on Apr 19, 2024

  1. [Determinism] Enable environment var to use cusparse spmm determinist… 

    …ic algorithm (#7310)

Co-authored-by: Hongzhi (Steve), Chen <chenhongzhi.nkcs@gmail.com>
    @TristonC @frozenbugs
    TristonC and frozenbugs committed Apr 19, 2024
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  2. [Misc] Add Triston to jenkins allowlist. (#7327) 

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    @frozenbugs
    frozenbugs and Ubuntu committed Apr 19, 2024
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  3. [GraphBolt][CUDA] Add missing thrust include for later CCCL versions. (… 

    …#7325)
    @mfbalin
    mfbalin committed Apr 19, 2024
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  4. [GraphBolt] Enable DistributedItemSampler test only on CPU. (#7323)

    @mfbalin
    mfbalin committed Apr 19, 2024
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  5. Revert "[GraphBolt] Quick fix for GCC 8" (#7328)

    @mfbalin
    mfbalin committed Apr 19, 2024
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Commits on Apr 20, 2024

  1. [CUDA] Remove unused headers for CCCL 2.4 compat (#7329)

    @mfbalin
    mfbalin committed Apr 20, 2024
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  2. [GraphBolt][CUDA] Minibatch.to() patch. (#7330)

    @mfbalin
    mfbalin committed Apr 20, 2024
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Commits on Apr 22, 2024

  1. [GraphBolt][CUDA] Update copy_to. (#7332) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Apr 22, 2024
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  2. [GraphBolt] Remove unused attributes in minibatch. (#7337) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Apr 22, 2024
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Commits on Apr 23, 2024

  1. [Temporal]Fix tensor option mismatch issue (#7346) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-21-218.ap-northeast-1.compute.internal>
    @peizhou001
    peizhou001 and Ubuntu committed Apr 23, 2024
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Commits on Apr 24, 2024

  1. [GraphBolt] Update docstring related to cleaning up seed_nodes and … 

    …`node_pairs`. (#7341)

Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Apr 24, 2024
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Commits on Apr 25, 2024

  1. [GraphBolt] Update tests related to seeds refactor. (#7352) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Apr 25, 2024
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  2. [GraphBolt][Doc] Update docs related to seeds. (#7351) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Apr 25, 2024
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Commits on Apr 26, 2024

  1. [dev] upgrade minimum required torch version to 2.0.0 (#7358)

    @Rhett-Ying
    Rhett-Ying committed Apr 26, 2024
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Commits on Apr 28, 2024

  1. [Temporal] Add link prediction example (#7347) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-21-218.ap-northeast-1.compute.internal>
    @peizhou001
    peizhou001 and Ubuntu committed Apr 28, 2024
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  2. [GraphBolt] Hyperlink support in subgraph_sampler. (#7354) 

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-133.us-west-2.compute.internal>
    @yxy235
    yxy235 and Ubuntu committed Apr 28, 2024
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  3. [GraphBolt] Optimize hetero sampling on CPU (#7360)

    @RamonZhou
    RamonZhou committed Apr 28, 2024
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Commits on Apr 29, 2024

  1. [graphbolt] Disable liburing (#7366)

    @pyynb
    pyynb committed Apr 29, 2024
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  2. [GraphBolt] Hetero CPU sampling bug fix. (#7369)

    @mfbalin
    mfbalin committed Apr 29, 2024
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  3. [GraphBolt] Refactor sampling (#7367)

    @RamonZhou
    RamonZhou committed Apr 29, 2024
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Commits on May 6, 2024

  1. [release] update version (#7373)

    @Rhett-Ying
    Rhett-Ying committed May 6, 2024
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Commits on May 10, 2024

  1. [release] cherry-pick from master and release for 2.2.1 (#7388) 

    Co-authored-by: Muhammed Fatih BALIN <m.f.balin@gmail.com>
Co-authored-by: Xinyu Yao <77922129+yxy235@users.noreply.github.com>
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    @Rhett-Ying @mfbalin @yxy235
    4 people committed May 10, 2024
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  2. [release] bump version to 2.2.1 (#7389)

    @Rhett-Ying
    Rhett-Ying committed May 10, 2024
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